Conference Program
 
Archaea: Ecology, Metabolism & Molecular Biology
August 19-24, 2007
Proctor Academy
Andover, NH

The Archaea are a fascinating and diverse group of prokaryotic organisms with deep roots overlapping those of eukaryotes. The focus of this GRC conference, "Archaea: Ecology Metabolism & Molecular Biology", expands on a number of emerging topics highlighting the evolution and composition of microbial communities and novel archaeal species, their impact on the environment, archaeal metabolism, and research that stems from sequence analysis of archaeal genomes. The strength of this conference lies in its ability to couple reputable areas with new scientific topics in an atmosphere of stimulating exchange. This conference remains an excellent opportunity for younger scientists to interact with world experts in this field.


Contributors

SUNDAY
2:00 pm - 11:00 pmArrival and Check-in
6:00 pmDinner
7:30 pm - 7:40 pmWelcome / Introductory Comments by GRC Site Staff
7:40 pm - 8:30 pmKEYNOTE SPEAKER
Introduction to Keynote: Imke Schroeder (University of California, Los Angeles)
7:40 pm - 8:20 pm John Reeve (Ohio State University)
"Starting and Stopping Transcription"
8:20 pm - 8:30 pm Discussion
8:30 pm - 9:30 pmMICROBIAL COMMUNITIES
Discussion Leader: Imke Schroeder (University of California, Los Angeles)
8:30 pm - 8:55 pm Christa Schleper (University of Bergen)
"Ammonia Oxidizing Crenarchaeota in Soils and Hot Springs"
8:55 pm - 9:00 pm Discussion
9:00 pm - 9:25 pm David Stahl (University of Washington)
"Ammonia Oxidizing Archaea and Their Place in the Nitrogen Cycle"
9:25 pm - 9:30 pm Discussion
MONDAY
7:30 am - 8:30 amBreakfast
8:30 amGroup Photo
9:00 am - 12:30 pmGENOMES AND GENE REGULATION
Discussion Leader: John Reeve (Ohio State University)
9:00 am - 9:25 am John van der Oost (Wageningen University)
"Global Regulation in Archaea"
9:25 am - 9:30 am Discussion
9:30 am - 9:55 am Jocelyne DiRuggiero (University of Maryland)
"Whole Genome Response to Oxidative Stress in Halobacterium"
9:55 am - 10:00 am Discussion
10:00 am Coffee Break
10:30 am - 10:55 am Rob Gunsalus (University of California, Los Angeles)
"Coordinate Control of Methanogen Pathways Leading to Methane Formation"
10:55 am - 11:00 am Discussion
11:00 am - 11:25 am Ruth Schmitz-Streit (University of Kiel)
"Genome-Wide Transcriptional Analysis in Methanosarcina mazei"
11:25 am - 11:30 am Discussion
11:30 am - 11:55 am William Metalf (University of Illinois at Urbana-Champaign)
"Regulation of Genes Involved in Methylotrophic Methanogenesis in Methanosarcina Species"
11:55 am - 12:00 pm Discussion
12:00 pm - 12:25 pm Ken Jarrell (Queen's University Kingston)
"Inframe Deletion and Complementation of Genes Involved in Posttranslational Modification and Assembly of Flagella in Methanococcus maripaludis"
12:25 pm - 12:30 pm Discussion
12:30 pmLunch
1:30 pm - 4:00 pmFree Time
4:00 pm - 6:00 pmPoster Session
6:00 pmDinner
7:30 pm - 9:30 pmPHYSIOLOGY AND REGULATION OF CARBOHYDRATE METABOLISM
Discussion Leader: Barny Whitman (University of Georgia)
7:30 pm - 7:55 pm Peter Schönheit (University of Kiel)
"Unusual Enzymes of Archaeal Glycolysis and Acetate Formation"
7:55 pm - 8:00 pm Discussion
8:00 pm - 8:25 pm Bettina Siebers (University of Duisburg-Essen)
"Trehalose Metabolism in Thermoproteus tenax"
8:25 pm - 8:30 pm Discussion
8:30 pm - 8:55 pm Paul Blum (University of Nebraska Lincoln)
"Toxin/Antitoxins and Carbon Flux in Sulfolobus solfataricus"
8:55 pm - 9:00 pm Discussion
9:00 pm - 9:25 pm Haruyuki Atomi (Kyoto University)
"Unusual Pentose Metabolism in Thermococcus kodakaraensis"
9:25 pm - 9:30 pm Discussion
TUESDAY
7:30 am - 8:30 amBreakfast
9:00 am - 12:30 pmARCHAEAL PROTEINS AND PHYSIOLOGY
Discussion Leader: Francine Perler (New England Biolabs)
9:00 am - 9:25 am Biswarup Mukhopadhyay (Virginia Bioinformatics Institute, State University)
"Sulfite Reduction in Methanogenic Archaea - New Enzymes and New Hypotheses on Two Ancient Metabolisms"
9:25 am - 9:30 am Discussion
9:30 am - 9:55 am Arnulf Kletzin (Technical University Darmstadt)
"Mechanisms of Sulfur Oxidation in Acidianus ambivalens"
9:55 am - 10:00 am Discussion
10:00 am Coffee Break
10:30 am - 10:55 am Simon de Vries (Technical University Delft)
"Structural and Functional Variations of Archaeal Denitrification Pathways"
10:55 am - 11:00 am Discussion
11:00 am - 11:25 am Rolf Thauer (Max Planck Institute for Terrestrial Microbiology Marburg)
"How Methanogenic Archaea Activate H2: Function and Structure of the Fe-Hydrogenase Hmd"
11:25 am - 11:30 am Discussion
11:30 am - 11:55 am Mark Young (Montana State University)
"Coping with Oxidative Stress: Role of the Dps Protein in Sulfolobus solfataricus"
11:55 am - 12:00 pm Discussion
12:00 pm - 12:25 pm Robert White (Virginia Polytechnic Institute and State University)
"Evolution of Metabolism on Earth"
12:25 pm - 12:30 pm Discussion
12:30 pmLunch
1:30 pm - 4:00 pmFree Time
4:00 pm - 6:00 pmPoster Session
6:00 pmDinner
7:30 pm - 9:30 pmPROTEIN TRANSLOCATION AND PROCESSING
Discussion Leader: Mecki Pohlschröder (University of Pennsylvania)
7:30 pm - 7:55 pm Jerry Eichler (Ben Gurion University)
"Sweet and Salty: Protein Glycosylation in Haloferax volcanii"
7:55 pm - 8:00 pm Discussion
8:00 pm - 8:25 pm Peter Lund (University of Birmingham)
"Chaperonin-Mediated Protein Folding in the Halophilic Archaeon Haloferax volcanii"
8:25 pm - 8:30 pm Discussion
8:30 pm - 8:55 pm Sonja Albers (University of Groningen)
"Functional Analysis of Secretion Systems Involved in the Assembly of Extracellular Appendages in the Cell Envelope of Sulfolobus solfataricus"
8:55 pm - 9:00 pm Discussion
9:00 pm - 9:25 pm Julie Maupin-Furlow (University of Florida)
"Archaeal Proteasomes and Post-Translational Regulation"
9:25 pm - 9:30 pm Discussion
WEDNESDAY
7:30 am - 8:30 amBreakfast
9:00 am - 12:30 pmECOLOGY OF EMERGING ARCHAEA
Discussion Leader: Karl Stetter (University of Regensburg)
9:00 am - 9:25 am Rick Caviccioli (University of New South Wales)
"Learning about Cold Adaptation from Psychrophilic Archaea"
9:25 am - 9:30 am Discussion
9:30 am - 9:55 am Charles Robertson (University of Colorado)
"New Perspectives on Archaeal Phylogenetics"
9:55 am - 10:00 am Discussion
10:00 am Coffee Break
10:30 am - 10:55 am Todd Low (University of California, Santa Cruz)
"Sequencing of Four New Pyrobaculum Species Reveals Clues to Genome Evolution and Novel RNA Genes"
10:55 am - 11:00 am Discussion
11:00 am - 11:25 am Steven Hallam (University of British Columbia Bioinformatics Center)
"Assembling a functional mosaic: The composite genome of Cenarchaeum symbiosum"
11:25 am - 11:30 am Discussion
11:30 am - 11:55 am James Elkins (University of California, San Diego)
"A Complete Korarchaeal Genome Sequence Reveals a Unique Combination of Signature Genes"
11:55 am - 12:00 pm Discussion
12:00 pm - 12:30 pmBusiness Meeting
(Nominations for the next Vice Chair; Fill out Conference Evaluation Forms; Discuss future Site & Scheduling preferences; Election of the next Vice Chair)
12:30 pmLunch
1:30 pm - 4:00 pmFree Time
4:00 pm - 6:00 pmPoster Session
6:00 pmDinner
7:30 pm - 9:30 pmINFORMATION PROCESSING
Discussion Leader: Michael Thomm (University of Regensburg)
7:30 pm - 7:55 pm Steve Bell (University of Cambridge)
"DNA Replication in Sulfolobus"
7:55 pm - 8:00 pm Discussion
8:00 pm - 8:25 pm Joseph Krzycki (Ohio State University)
"Transmissible Biosynthesis and Genetic Encoding of Pyrrolysine"
8:25 pm - 8:30 pm Discussion
8:30 pm - 8:55 pm Dieter Söll (Yale University)
"Protein Synthesis: Archaea-Specific Processes"
8:55 pm - 9:00 pm Discussion
9:00 pm - 9:25 pm Katsuhiko Murakami (Pennsylvania State University)
"X-ray Crystal Structure of RNA Polymerase from Archaea"
9:25 pm - 9:30 pm Discussion
THURSDAY
7:30 am - 8:30 amBreakfast
9:00 am - 12:30 pmRECOMBINATION AND REPAIR
Discussion Leader: Malcolm White (St. Andrew's University)
9:00 am - 9:25 am Thorsten Allers (University of Nottingham)
"DNA Damage Response in Haloferax volcanii - Role of Mre11-Rad50"
9:25 am - 9:30 am Discussion
9:30 am - 9:55 am Linda DeVeaux (Idaho State University)
"Halobacterium and Radiation: Resistance is Not Futile!"
9:55 am - 10:00 am Discussion
10:00 am Coffee Break
10:30 am - 10:55 am Denis Grogan (University of Cincinnati)
"Genetic Recombination in Sulfolobus: Examining Substrate Requirements"
10:55 am - 11:00 am Discussion
11:00 am - 11:25 am Isaac Cann (University of Illinois at Urbana-Champaign)
"A Unique Archaeal Clamp Loader Assembles and Loads the Clamp: a Nexus for DNA Replication, Repair, and Recombination Proteins"
11:25 am - 11:30 am Discussion
11:30 am - 11:55 am Yoshizumi Ishino (Kyusho Univeristy)
"Variation of PCNA-interacting Site in the Archaeal DNA Replication/Repair Proteins"
11:55 am - 12:00 pm Discussion
12:00 pm - 12:25 pm Ed Bolt (University of Nottingham)
"Getting Caught Copying: Proteins Promoting DNA Replication Past Lesions in Archaea"
12:25 pm - 12:30 pm Discussion
12:30 pmLunch
1:30 pm - 4:00 pmFree Time
4:00 pm - 6:00 pmPoster Session
6:00 pmDinner
7:30 pm - 8:30 pmStudent Short Talks and Student Poster Awards
Discussion Leader: Moshe Mevarech (Tel-Aviv University)
8:30 pm - 9:30 pmEVOLUTION AND THE TREE OF LIFE
Discussion Leader: Moshe Mevarech (Tel-Aviv University)
8:30 pm - 8:55 pm Eugene Koonin (National Institute of Health)
"Evolution of Archaeal Gene Content"
8:55 pm - 9:00 pm Discussion
9:00 pm - 9:25 pm Patrick Forterre (University of Paris)
"The Universal Protein Set and the Nature of LUCA. Discovery of a Novel Universal Protein Essential for Genome Stability"
9:25 pm - 9:30 pm Discussion
FRIDAY
7:30 am - 8:30 amBreakfast
9:00 amDepart