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Conference Program
 
Proteolytic Enzymes & Their Inhibitors
Proteolysis: The Most Important Post Translational Modification Regulating Biology, Life and Death of Every Cell
June 17-22, 2012
Renaissance Tuscany Il Ciocco Resort
Lucca (Barga), Italy
Chair:
Klaudia Brix

Vice Chair:
James C. Whisstock

Related Meeting Information
The Proteolytic Enzymes & Their Inhibitors Gordon Research Conference was held in conjunction with the Proteolytic Enzymes & Their Inhibitors Gordon-Merck Research Seminar. Please refer to the Proteolytic Enzymes & Their Inhibitors GMRS web page for more information.

Proteolytic enzymes act in a resolute fashion to direct the well structured universe of cellular molecules. Proteolytic enzymes must acquire delicate molecular structures to initiate and execute their tasks. Proteolytic enzymes are supervised by their inhibitors. It is the team work of proteolytic enzymes and their inhibitors which makes a go of many cellular functions. We recognize proteolytic enzymes as managers that catalyze the most important and ubiquitous post-translational modifications in cells. Irreversible and uncompromising, proteases regulate life and death of every organism. Diseases caused by mutations in the genes of proteases or their inhibitors, threats introduced by bacterial, fungal or viral proteases taught us to look more closely on the hundreds of diverse proteases and the many inhibitors interacting with them to direct cellular functions.

Evolution was clever enough to come up with an excellent system of cellular decision makers, but the system can be cheated in the most mischievous way – arthritis, cancer, diabetes, obesity, malaria, neurodegenerative disorders and many more can be caused by stray proteolytic enzymes and their inhibitors. Understanding the structures and functions of proteases, watching proteases in action, and approaching their intricacies in the protease web is a must but more so, it is a hope for designing new drugs and better therapeutic treatments based on translational research. On the bright side of life, proteases enable development and maintain physiology. Proteases and their inhibitors are clearly sustainable, they are vital.

Klaudia Brix and James Whisstock invite you to explore the post-genomics and not-yet-post-proteomics times of proteolytic enzymes and their inhibitors. The 2012 Proteolytic Enzymes and Their Inhibitors Gordon Research Conference will present the most exciting advances in proteolysis research. We will continue to explain how, when and where cells become radical, desperate and visionary enough to perform proteolytic cleavages. Dogmas may still exist and data is overwhelmingly complex, networks seem within and beyond our scopes, but you may expect to experience the most cooperative, friendly, and integrative families of multidisciplinary researchers unravelling the secrets of proteolytic enzymes and their inhibitors.

We plan to build bridges spanning the many disciplines of life sciences that engage in the field of proteolysis. Researchers from academia and industry are welcome, younger scientists will be involved as much as established researchers. For the first time in the history of the GRC on Proteolytic Enzymes and Their Inhibitors, the accompanying Gordon Research Seminar will serve as the ideal inauguration for the younger scientists. The GRS is open to Graduate Students and Post Docs exclusively while allowing only few Senior Mentors to assist Sheena McGowan igniting the Spirit of the Gordon Conference in the beauty of Tuscany – join us for The forward-looking, enjoyable and most rewarding conference on proteolysis in 2012.

Klaudia Brix
Chair, 2012 Proteolytic Enzymes and Inhibitors GRC


Contributors

SUNDAY
4:00 pm - 8:00 pmArrival and Check-in (Check-in Desk Closed 6:00 pm - 7:45 pm)
6:00 pmDinner
7:30 pm - 7:38 pmWelcome by Klaudia Brix (Jacobs University) / Introductory Comments by GRC Site Staff
7:38 pm - 9:30 pmThe Active Site of Proteases
Discussion Leader: Klaudia Brix (Jacobs University)
7:38 pm - 7:58 pm Wolfram Bode (Max-Planck-Institute of Biochemistry)
"Substrate presentation: a mechanism for gaining activity and specificity"
7:58 pm - 8:06 pm Discussion
8:06 pm - 8:26 pm James Whisstock (Monash University)
"The X-ray crystal structure of full length human plasminogen"
8:26 pm - 8:34 pm Discussion
8:34 pm - 8:54 pm Guy S. Salvesen (Sanford-Burnham Medical Research Institute)
"Smallpox Protease"
8:54 pm - 9:02 pm Discussion
9:02 pm - 9:22 pm Bonnie F. Sloane (Wayne State University)
"The Active Sites of Tumor Proteolysis: Now Playing in Living Color and 5D"
9:22 pm - 9:30 pm Discussion
9:30 pm - 12:00 amReception on the terrace
MONDAY
7:30 am - 8:30 amBreakfast
9:00 am - 12:30 pmAnimal Models for Studies on Proteolysis
Discussion Leader: Christoph Peters (Albert-Ludwigs-Universität Freiburg)
9:00 am - 9:20 am Annik Prat (Clinical Research Institute of Montreal - IRCM)
"Proprotein convertases: from phenotypes to substrates"
9:20 am - 9:30 am Discussion
9:30 am - 9:50 am Agnès Noel (University of Liège)
"Revisited Functions of MMP in lymphangiogenesis and tissue remodeling"
9:50 am - 10:00 am Discussion
10:00 am Group Photo / Coffee Break
10:30 am - 10:50 am Margarete M.S. Heck (University of Edinburgh)
"Using the fish and the fly to tease out invadolysin's secrets"
10:50 am - 11:00 am Discussion
11:00 am - 11:20 am John W.M. Creemers (K.U. Leuven)
"Prolyl oligopeptidase-like enzyme PREPL"
11:20 am - 11:30 am Discussion
11:30 am - 11:45 am Kenn Holmbeck (NIDCR)
"Cell and Tissue Specific Roles of Membrane-Type Matrix Metalloproteinase Activity in Development and Postnatal Connective Tissue Homeostasis"
11:45 am - 11:50 am Discussion
11:50 am - 12:05 pm Stephanie Dauth (Jacobs University)
"Cathepsin K - protease of osteoclasts and epithelial cells with important functions in the central nervous system"
12:05 pm - 12:10 pm Discussion
12:10 pm - 12:25 pm Leila Akkari (Memorial Sloan-Kettering Cancer Center)
"Macrophage- and cancer cell-derived cathepsin X combine to promote tumor malignancy"
12:25 pm - 12:30 pm Discussion
12:30 pmLunch
1:30 pm - 4:00 pmFree Time
4:00 pm - 5:30 pmPoster Session 1
5:30 pm - 7:30 pmNetworking in Proteolysis - From Molecules to Complex Systems
Discussion Leader: Walter Stöcker (University of Mainz)
5:30 pm - 5:50 pm Irit Sagi (The Weizmann Institute)
"Collagen Proteolysis: from Biophysical Principles to Drug Design"
5:50 pm - 6:00 pm Discussion
6:00 pm - 6:20 pm Christopher M. Overall (University of British Columbia)
"Moonlighting MMPs: The ins and outs of nuclear MMP12 activity"
6:20 pm - 6:30 pm Discussion
6:30 pm - 6:50 pm Stefan F. Lichtenthaler (German Center for Neurodegenerative Diseases)
"Proteome-Wide Identification of Physiological BACE1 Substrates in Primary Neurons and Mouse Brain"
6:50 pm - 7:00 pm Discussion
7:00 pm - 7:20 pm Christoph Becker-Pauly (University of Kiel)
"Structure and function of dimeric transmembrane meprin β: A sheddase of APP with possible functions in neurodegenerative disorders"
7:20 pm - 7:30 pm Discussion
8:00 pmDinner
9:00 pm - 11:00 pmFluidic Poster Session
Chair: Aimee Shen (University of Vermont)
TUESDAY
7:30 am - 8:30 amBreakfast
9:00 am - 12:30 pmProteolysis in Signaling Events
Discussion Leaders: Nabil G. Seidah (Clinical Research Institute of Montreal - IRCM) and Judith Clements (Queensland University of Technology)
9:00 am - 9:20 am Matthew Freeman (MRC Laboratory of Molecular Biology)
"The rhomboid-like clan and the control of signalling"
9:20 am - 9:30 am Discussion
9:30 am - 9:50 am Sin Urban (Johns Hopkins University School of Medicine)
"Rhomboid proteolysis: signaling from inside the membrane"
9:50 am - 10:00 am Discussion
10:00 am Coffee Break
10:30 am - 10:50 am Robert Pike (Monash University)
"Regulating the signals of complement: targeting the initiation of the cascade"
10:50 am - 11:00 am Discussion
11:00 am - 11:20 am Nabil Seidah (Clinical Research Institute of Montreal - IRCM)
"The unique, redundant and opposite functions of the proprotein convertases"
11:20 am - 11:30 am Discussion
11:30 am - 11:50 am Judith Clements (Queensland University of Technology)
"New insights into the function of the kallikrein-related peptidases in cancer"
11:50 am - 12:00 pm Discussion
12:00 pm - 12:10 pm Daniel Fleck (Ludwig-Maximilians University Munich)
"Neuregulin-1 type III - a substrate for regulated intramembrane proteolysis by multiple sheddases and intramembrane proteases"
12:10 pm - 12:15 pm Discussion
12:15 pm - 12:30 pm Judith Clements (Queensland University of Technology) and Nabil G. Seidah (Clinical Research Institute of Montreal - IRCM)
"Open Discussion"
12:30 pmLunch
1:30 pm - 4:00 pmFree Time
4:00 pm - 5:30 pmPoster Session 2
5:30 pm - 7:30 pmProteases in Infectious and Tropical Diseases
Discussion Leaders: James McKerrow (UCSF) and Sheena McGowan (Monash University)
5:30 pm - 5:50 pm Sheena McGowan (Monash University)
"The streptococcal C1 phage lysin, PlyC - structural studies of a novel glycosyl hydrolase"
5:50 pm - 6:00 pm Discussion
6:00 pm - 6:15 pm Doron C. Greenbaum (University of Pennsylvania)
"Signal Peptide Peptidase as an Antiparasitic Drug Target"
6:15 pm - 6:20 pm Discussion
6:20 pm - 6:27 pm Best Speaker of GRS: Elfriede Dall (University of Salzburg)
"Crystal structures of legumain reveal an open sesame activation mechanism"
6:27 pm - 6:30 pm Discussion
6:30 pm - 6:50 pm Jan Potempa (University of Louisville)
"Proteolysis as a key factor in the protein secretion by periodontal pathogens"
6:50 pm - 7:00 pm Discussion
7:00 pm - 7:15 pm Aimee Shen (University of Vermont)
"Proteolytic regulation of spore germination in Clostridium difficile"
7:15 pm - 7:20 pm Discussion
7:20 pm - 7:27 pm Markus Mastny (IMP - Research Institute of Molecular Pathology Vienna)
"The CtpB protease composes a structural bottleneck controlling spore formation in Bacillus subtilis"
7:27 pm - 7:30 pm Discussion
8:00 pmDinner
9:00 pm - 11:00 pmFluidic Poster Session
Chair: James Whisstock (Monash University)
WEDNESDAY
7:30 am - 8:30 amBreakfast
9:00 am - 12:30 pmProteases in Cancer and Fibrotic Disease
Discussion Leaders: Thomas Reinheckel (Albert-Ludwigs-Universität Freiburg) and Bonnie F. Sloane (Wayne State University)
9:00 am - 9:20 am Thomas Reinheckel (Albert-Ludwigs-Universität Freiburg)
"Translational regulation of cathepsin L expression: evidence from novel mouse models"
9:20 am - 9:30 am Discussion
9:30 am - 9:50 am Dieter Brömme (University of British Columbia)
"From fibrils to peptides: Mechanistic insights into the degradation of collagen by cathepsin K"
9:50 am - 10:00 am Discussion
10:00 am Coffee Break
10:30 am - 10:50 am Johanna Joyce (Memorial Sloan-Kettering Cancer Center)
"Investigating tumor-stromal cell interactions in different metastatic microenvironments: a focus on proteases and their inhibitors"
10:50 am - 11:00 am Discussion
11:00 am - 11:20 am Daniel Hargbøl Madsen (Finsen Laboratory)
"Direct imaging of collagen turnover in vivo reveals a critical role of intracellular degradation by macrophages and fibroblasts"
11:20 am - 11:30 am Discussion
11:30 am - 11:50 am Mark Gorrell (Centenary Institute, University of Sydney)
"Fibroblast Activation Protein in Chronic Disease"
11:50 am - 12:00 pm Discussion
12:00 pm - 12:20 pm Boris Turk (Jozef Stefan Institute)
"Extracellular cathepsins - sheddases and more"
12:20 pm - 12:30 pm Discussion
12:30 pmLunch
1:30 pm - 4:00 pmFree Time
4:00 pm - 5:30 pmPoster Session 3
5:30 pm - 7:30 pmProtease Inhibitors and Activators, and Their Biological Significance
Discussion Leader: Henning Stennicke (Novo Nordisk A/S)
5:30 pm - 5:50 pm F. Xavier Gomis-Rüth (Molecular Biology Institute of Barcelona, CSIC)
"Insight into a molecular Venus flytrap: the structure of human methylamine-treated α2-macroglobulin"
5:50 pm - 6:00 pm Discussion
6:00 pm - 6:20 pm James A. Huntington (University of Cambridge)
"Structure of the Prothrombinase Complex"
6:20 pm - 6:30 pm Discussion
6:30 pm - 6:50 pm Daniel A. Lawrence (University of Michigan)
"Crystal structure of a novel small molecule inactivator bound to plasminogen activator inhibitor-1: Therapeutic targeting of a metastable protein"
6:50 pm - 7:00 pm Discussion
7:00 pm - 7:20 pm Henning Stennicke (Novo Nordisk A/S)
"Blocking the interaction between Factor Xa and Tissue Factor Pathway Inhibitor (TFPI) as an alternative approach to haemophilia treatment"
7:20 pm - 7:30 pm Discussion
8:00 pmDinner
9:00 pm - 11:00 pmFluidic Poster Session
Chair: Jan Potempa (University of Louisville)
THURSDAY
7:30 am - 8:30 amBreakfast
8:30 am - 9:00 amBusiness Meeting
Nominations for the next Vice Chair; Fill out Conference Evaluation Forms; Discuss future Site & Scheduling preferences; Election of the next Vice Chair
9:00 am - 12:30 pmProteases and Inhibitors in Translational Approaches
Discussion Leaders: Robert A. Lazarus (Genentech, Inc.) and Hans-Ulrich Demuth (Probiodrug AG)
9:00 am - 9:20 am Bob Lazarus (Genentech, Inc.)
"From Inhibiting Proteases to Activating Zymogens"
9:20 am - 9:30 am Discussion
9:30 am - 9:50 am Matthew S. Bogyo (Stanford University)
"Engineering proteases for selective inhibition and probe binding"
9:50 am - 10:00 am Discussion
10:00 am Coffee Break
10:30 am - 10:45 am Roberta Burden (Queen's University Belfast)
"Unravelling the role of cathepsin S in the tumour microenvironment"
10:45 am - 10:50 am Discussion
10:50 am - 11:00 am Jonathan M. Harris (Queensland University of Technology)
"Bioscaffolding approaches to protease inhibitor design"
11:00 am - 11:05 am Discussion
11:05 am - 11:23 am Olga Vasiljeva (CytomX)
"Leveraging Protease Activity for Targeted Antibody Activation at the Site of Disease"
11:23 am - 11:30 am Discussion
11:30 am - 11:50 am Galia Blum (The Hebrew University, Jerusalem)
"Quenched caspase probes for investigation of apoptosis"
11:50 am - 12:00 pm Discussion
12:00 pm - 12:20 pm Hans-Ulrich Demuth (Probiodrug AG)
"Transfer of a mechanistic concept to pharmacological application - Inhibition of isoGlutaminyl Cyclase a case study in inflammation"
12:20 pm - 12:30 pm Discussion
12:30 pmLunch
1:30 pm - 5:30 pmFree Time
5:30 pm - 7:30 pmPerspectives in Proteolysis
Discussion Leader: James Whisstock (Monash University)
5:30 pm - 5:50 pm Phillip I. Bird (Monash University)
"Granzyme B: not just a murderer"
5:50 pm - 6:00 pm Discussion
6:00 pm - 6:20 pm Justin Boddey (The Walter and Eliza Hall Institute)
"Function and inhibition of Plasmepsin V in directing export of malarial proteins into human erythrocytes"
6:20 pm - 6:30 pm Discussion
6:30 pm - 6:50 pm Edgar Deu (Stanford University, School of Medicine)
"A fragmenting hybrid approach for the targeted delivery of protease inhibitors to the malaria parasite"
6:50 pm - 7:00 pm Discussion
7:00 pm - 7:10 pm Hans Brandstetter (University of Salzburg)
"In the headlock: Structure and mechanism of collagen degradation by clostridial collagenases"
7:10 pm - 7:15 pm Discussion
7:15 pm - 7:25 pm Nathan Thomsen (UCSF)
"Structural basis for activation of the caspase-3 and caspase-7 zymogens"
7:25 pm - 7:30 pm Discussion
8:00 pmGala Dinner and Farewell Reception on the terrace
FRIDAY
7:30 am - 8:30 amBreakfast
9:00 amDeparture

 
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