Sunday |
2:00 pm - 9:00 pm | Arrival and Check-in |
6:00 pm | Dinner |
7:30 pm - 7:40 pm | Welcome / Introductory Comments by GRC Site Staff |
7:40 pm - 9:30 pm | Keynote Session: Characterizing the Common Patterns of Genetic
Variation |
| Discussion Leader: Natarajan Kannan (University of Georgia, USA) |
7:40 pm - 7:50 pm | Opening Remarks |
7:50 pm - 8:00 pm | Introduction by Discussion Leader |
8:00 pm - 8:35 pm | Ruth Nussinov (National Cancer Institute, NIH, USA) "Oncogenic K-Ras: The Undruggable Protein" |
8:35 pm - 8:45 pm | Discussion |
8:45 pm - 9:20 pm | Chris Sander (Dana-Farber Cancer Institute, USA) "Functional Fitness of Proteins Quantified Using Maximum Entropy Probability Models of Natural Sequence Variation" |
9:20 pm - 9:30 pm | Discussion |
Monday |
7:30 am - 8:30 am | Breakfast |
8:30 am | Group Photo |
9:00 am - 12:30 pm | Assessing the Effects of Variations on Protein Biophysical Characteristics |
| Discussion Leader: Nir Ben-Tal (Tel Aviv University, Israel) |
9:00 am - 9:10 am | Introduction by Discussion Leader |
9:10 am - 9:40 am | Olivier Lichtarge (Baylor College of Medicine, USA) "Evolutionary Action Measures the Clinical Effect of Mutations on Fitness" |
9:40 am - 9:50 am | Discussion |
9:50 am - 10:20 am | Marianne Rooman (Université Libre de Bruxelles, Belgium) "Knowledge-Driven Prediction of Protein Stability for Assessing the Pathogenic Effect of Exomic Variants" |
10:20 am - 10:30 am | Discussion |
10:30 am - 10:50 am | Coffee Break |
10:50 am - 11:20 am | Daniel Bolon (University of Massachusetts Medical School, USA) "Utilizing EMPIRIC Mutational Scans to Investigate the Distinction Between Health and Disease" |
11:20 am - 11:30 am | Discussion |
11:30 am - 12:00 pm | Emil Alexov (Clemson University, USA) "Rescuing Disease-Causing Effects with Targeted Small Molecule Binding" |
12:00 pm - 12:10 pm | Discussion |
12:10 pm - 12:25 pm | Selected from Poster Abstracts: Ogun Adebali (University of Tennessee, USA) "Establishing the Precise Evolutionary History of a Gene Improves Predicting Disease-Causing Missense Mutations" |
12:25 pm - 12:30 pm | Discussion |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session |
6:00 pm | Dinner |
7:30 pm - 9:30 pm | Mutations, Protein Interaction Networks and Pathways |
| Discussion Leader: Ozlem Keskin (Koc University, Turkey) |
7:30 pm - 7:40 pm | Introduction by Discussion Leader |
7:40 pm - 8:10 pm | Nir Ben-Tal (Tel Aviv University, Israel) "Navigating in Protein Space" |
8:10 pm - 8:20 pm | Discussion |
8:20 pm - 8:50 pm | Bruce Aronow (Cincinnati Children's Research Institute, USA) "Multidimensional Network Analysis of Loss of Function and Non-Synonymous Variants" |
8:50 pm - 9:00 pm | Discussion |
9:00 pm - 9:15 pm | Selected from Poster Abstracts: Viviane Labrie (Van Andel Research Institute, USA) "Lactase Nonpersistence Is Directed by DNA-Variation-Dependent Epigenetic Aging" |
9:15 pm - 9:20 pm | Discussion |
9:20 pm - 9:30 pm | General Discussion |
Tuesday |
7:30 am - 8:30 am | Breakfast |
9:00 am - 12:30 pm | Characterizing
Variants in Cancer |
| Discussion Leader: Cristina Marino-Buslje (Leloir Institute, Argentina) |
9:00 am - 9:10 am | Introduction by Discussion Leader |
9:10 am - 9:40 am | Yue Xiong (University of North Carolina at Chapel Hill, USA) "IDH Mutation, Mechanism and Therapeutics in Human Cancers" |
9:40 am - 9:50 am | Discussion |
9:50 am - 10:20 am | Ludmil Alexandrov (Los Alamos National Laboratory, USA) "Signatures of Mutational Processes in Human Cancer" |
10:20 am - 10:30 am | Discussion |
10:30 am - 10:50 am | Coffee Break |
10:50 am - 11:20 am | Jinfeng Liu (Genentech, USA) "Mining Somatic Mutations and Transcriptomic Alterations for Cancer Target Discovery" |
11:20 am - 11:30 am | Discussion |
11:30 am - 12:00 pm | Maricel Kann (University of Maryland, Baltimore County, USA) "Protein Domain Landscape of Cancer Genomes" |
12:00 pm - 12:10 pm | Discussion |
12:10 pm - 12:25 pm | Selected from Poster Abstracts: Eva Berglund (Uppsala University, Sweden) "The Mutational Spectrum in Acute Lymphoblastic Leukemia Uncovered by Deep Targeted Sequencing" |
12:25 pm - 12:30 pm | Discussion |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session |
6:00 pm | Dinner |
7:30 pm - 9:30 pm | Computational Prediction of Phenotypic Effects of Disease Mutations |
| Discussion Leader: Predrag Radivojac (Indiana University, USA) |
7:30 pm - 7:40 pm | Introduction by Discussion Leader |
7:40 pm - 8:10 pm | Mauno Vihinen (Lund University, Sweden) "Towards Clinical Variation Interpretation - High-Performance Predictors" |
8:10 pm - 8:20 pm | Discussion |
8:20 pm - 8:50 pm | Yana Bromberg (Rutgers University, USA) "Interpreting Genomic Variation to Inform Pathogenesis Pathways" |
8:50 pm - 9:00 pm | Discussion |
9:00 pm - 9:15 pm | Selected from Poster Abstracts: Aimee Deaton (Amgen Inc, USA) "Rationalizing Off-Target Screening in Drug Development Using Human Genetics" |
9:15 pm - 9:20 pm | Discussion |
9:20 pm - 9:30 pm | General Discussion |
Wednesday |
7:30 am - 8:30 am | Breakfast |
9:00 am - 12:30 pm | SNVs and Copy Number Variations in Complex Diseases |
| Discussion Leader: Bonnie Berger (Massachusetts Institute of Technology, USA) |
9:00 am - 9:10 am | Introduction by Discussion Leader |
9:10 am - 9:40 am | Igor Rogozin (National Center for Biotechnology Information, National Library of Medicine, NIH, USA) "Aberrant Translation as a Putative Causative Factor for Autism: Support from Medical Data Mining" |
9:40 am - 9:50 am | Discussion |
9:50 am - 10:20 am | Lilia Iakoucheva (University of California, San Diego, USA) "Interpreting Genetic Variation in Psychiatric Diseases" |
10:20 am - 10:30 am | Discussion |
10:30 am - 10:50 am | Coffee Break |
10:50 am - 11:20 am | Joseph Gecz (The University of Adelaide, Australia) "Deciphering DNA Variation in PCDH19, an X-Chromosome Protocadherin Causing Female Limited Epilepsy, Intellectual Disability and Autism" |
11:20 am - 11:30 am | Discussion |
11:30 am - 12:00 pm | Gerhard Coetzee (Van Andel Research Institute, USA) "Post-GWAS Functionality of Parkinson's Disease" |
12:00 pm - 12:10 pm | Discussion |
12:10 pm - 12:25 pm | Selected from Poster Abstracts: Nobuko Katagiri (U.S. Food and Drug Administration, USA) "The Importance of mRNA Structure in Determining the Pathogenicity of Synonymous and Non-Synonymous Mutations in X-Linked Genes" |
12:25 pm - 12:30 pm | Discussion |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session |
6:00 pm | Dinner |
7:00 pm - 7:30 pm | Business Meeting |
| Nominations for the Next Vice Chair; Fill in Conference Evaluation Forms; Discuss Future Site and Scheduling Preferences; Election of the Next Vice Chair |
7:30 pm - 9:30 pm | Variants Causing Rare Diseases |
| Discussion Leader: Joel Bader (Johns Hopkins University, USA) |
7:30 pm - 7:40 pm | Introduction by Discussion Leader |
7:40 pm - 8:10 pm | Michael Brudno (University of Toronto, Canada) "Not the Same Old Broken Record: What a Genomics EHR Should Look Like" |
8:10 pm - 8:20 pm | Discussion |
8:20 pm - 8:50 pm | Steven Brenner (University of California, Berkeley, USA) "Diagnostic Role of Exome Sequencing in Immune Deficiency Disorders" |
8:50 pm - 9:00 pm | Discussion |
9:00 pm - 9:15 pm | Selected from Poster Abstracts: Nishanth Nair (University of Maryland, USA) "Driver Genes in Idiopathic Dilated Cardiomyopathy" |
9:15 pm - 9:20 pm | Discussion |
9:20 pm - 9:30 pm | General Discussion |
Thursday |
7:30 am - 8:30 am | Breakfast |
9:00 am - 12:30 pm | Precision Medicine in Practice |
| Discussion Leader: Dmitry Korkin (Worcester Polytechnic Institute, USA) |
9:00 am - 9:10 am | Introduction by Discussion Leader |
9:10 am - 9:40 am | Nicholas Tatonetti (Columbia University, USA) "Identifying Genomics Opportunities Using the EHR" |
9:40 am - 9:50 am | Discussion |
9:50 am - 10:20 am | Dana Crawford (Case Western Reserve University, USA) "All In! Precision Medicine in Cleveland" |
10:20 am - 10:30 am | Discussion |
10:30 am - 10:50 am | Coffee Break |
10:50 am - 11:20 am | Mark Boguski (Precision Medicine Network, USA) "Precision Diagnosis for Precision Medicine: Case Studies in Knowledge Visualization and Decision Support" |
11:20 am - 11:30 am | Discussion |
11:30 am - 12:00 pm | Robert Hughes (Buck Institute for Research on Aging, USA) "Natural Genetic Variation in Yeast Reveals Conserved Modifiers of PolyQ Aggregation" |
12:00 pm - 12:10 pm | Discussion |
12:10 pm - 12:25 pm | Selected from Poster Abstracts: Carola Droge (Heinrich Heine University Düsseldorf, Germany) "Sequencing of FIC1, BSEP, and MDR3 Revealed 139 Genetic Variants Including 63 New Ones in 389 Unrelated Patients with Suspected Intrahepatic Cholestasis" |
12:25 pm - 12:30 pm | Discussion |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session |
6:00 pm | Dinner |
7:30 pm - 9:30 pm | Variants and Pharmacogenomics |
| Discussion Leader: S. Banu Ozkan (Arizona State University, USA) |
7:30 pm - 7:40 pm | Introduction by Discussion Leader |
7:40 pm - 8:10 pm | Bissan Al-Lazikani (Institute of Cancer Research, United Kingdom) "Integrative Chemogenomics for Drug Target Selection and Personalised Treatment" |
8:10 pm - 8:20 pm | Discussion |
8:20 pm - 8:50 pm | Deanna Kroetz (University of California, San Francisco, USA) "Genetic Predictors of Chemotherapy-Induced Toxicity" |
8:50 pm - 9:00 pm | Discussion |
9:00 pm - 9:15 pm | Selected from Poster Abstracts: Lei Li (Indiana University - Purdue University Indianapolis, USA) "To Quantify a DNA Photolesion via LC/MS and Immunoassay" |
9:15 pm - 9:20 pm | Discussion |
9:20 pm - 9:30 pm | General Discussion |
Friday |
7:30 am - 8:30 am | Breakfast |
9:00 am | Departure |